Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805910.1_cds_XP_016494137.1_8577
CDS Infomation

[gene=LOC107813383] [db_xref=GeneID:107813383] [protein=uncharacterized protein LOC107813383 isoform X3] [protein_id=XP_016494137.1] [location=join(50791..50895,51802..52027,52147..52221,52509..52583,53468..53565,54515..54749,56060..56134,57016..57113,58047..58281,59074..59171,59510..59645,59802..59918,60249..60335,61763..62102,62292..62482,62564..62628,63294..63476)] [gbkey=CDS]
Sequence

ATGGGAGATGTGAAGAAATGGAGCGTGACGTACACGAAGCATCTCAAGCAGAAGCGAAAA
GTTTATCACGATGGCTTCTTAGAGCTTCAATCTTCAAGCCACAAGGCCATGCTCTATGAT
GATTGTGAGAAGCTGTTAGGCATTAAGATTTTGAAGAATGACGATGATGTCAAAACAGGC
GAAACACTGCCATTTGATTCTTACCTTGTTGATATTGGTGATCCTCACGGCGATTACAAC
CCTATACCCAAATTAAATACTAAACTGATGGATAAGAAAGTTCCGGTGGAATCTGGGCTA
CTGCATTCTGGGAAAAGCTCAACTGCTGTTGATAATAGGAAATCTAATCTGGGGAAAAGG
AAAGCAACACCAAGTAATCTAAGCCCATCACAAAAGATTATTAGAGAGTTCAAGAAAAGT
GAAGCTAGCAAATATGGTTCTTCTCCAGGTTCTCTTGATACAACAAAGTCAAGCACAGAA
GAATGGCAGGTATTGTACACCACACAAATAACTCAAAAGGCAAAGAAGTTCCATGATGGG
TATTTGCGACTTGTGATGTCTGGCTCACATGGCAAGCAGATCATGCTGTATGATGCAACC
AGGAGACTCCTAGATAGTAGGTTTCTGAAAAAGAATGAAAGTATCATGTCTGGCCAATCG
GTAACATTTGATGGTCACTTAGTGGAGATAGGAGAATCTGAGGAAGATCAAAAGCCTCCA
AAGGACCTTAGAGATCAAGGAAAGCATGTCACAGGACTTGGAAAAAGAGAACCAGTACAC
GGGGATGTCGGTGTCCATAACAAGTTTCCGGCTGAGTTCAAGAAGAGTGAAGTTCGCAAA
TATAGTTCTTCACCGGGTTCCCTTGACATGGCAAAGTCAAGCACAGAAGAATGGCAGGTA
CTCTACACCACACAAATAACTCAAAAGGCAAAGAAGTTCCATGATGGGATTTTGCGACTG
GTGATGTCTAGCTCACATGGAAAACAGATCATGCTGTATGATGCGACCAGGAGACTCCTA
GTTAGCAGGTTTCTGAAAAAGAATGAGAACATCGATTCTGGTGAATCGGTAACATTTGAT
GGTTACTTGGTGGATATTGGAGAATGTAAGGGAGACCAAAAGCCTCCAAAGGATATTAGT
CCTCGAGGAAAGCATATCAAGGAACTTGGAAAAAGAGGACCGGTACACGGGGAAGTTGCT
GTCCTCAATAAGTTGCTTGCTGAATGGGATGCCATGTATACAGCTCAGATAACTCAAAAG
GCAAAAAAGTACAATAATGGAATCCTTAGACTTTCATCCTGTGGTTCCTACCAATCTCAG
GTTACTCTACTTACAGAAGAAGGAAACATACTATGCCGAAGGTTCCTCAAGTTATCAGAA
CATGTCACAACTGGAACTACATTGAATCTGTCAAATTATTTGGTTGAAGTTGGTGACATG
AGGACAAGTCCAGAAGGAAAACCTCAAACTGATGCTTCTTCCCGAGAGCATGCACAATCT
GATTTTAAAATATCTGGACTCGACAATATCAAATCAAGTAGAAGAATCTCCTCTGACAAG
CCAATTCCTAATATGGAACATATGGACTCAAAGACTGCAAGCTGTTCTGTTGACAATACA
ATGAATTGTAGGATCTCCAGATCAAACTCTGTTCGTGCAGCTCATGAAATCTTGTCCATT
CTTAAAAAACCGATCTCTTCGAAAGGTGCTGGCACAGTAAGGGACATCACATTTGCAGAC
GAATGCCAAGTATTGCAGTCATCAAATCTTGTTTGCAGTGACATTAAGAGTCAAACAGAG
GAACATCTCTTGCAAGACTTCAATGTTAAAGGCAGTTCATCATTGCATAGGGAAGAACAA
ACTACCATGACGCATAGCAGCGGCACGAACCTTTCAGAAATAAAAGTTACTGATGCATTC
CATTTGGATGAAATTTCTCAACCATCGGATTGCACCGGTCAAAGAGTATATCATACTCGG
TCATTAAGCTTGTCTACAGGATTAGGAGAGATGGATATATGCTTGCGTGATGTAGAATGC
ACTGTCACAGAGAGGTCTCCAACTGCAAAGCTGAAGCATTTGGTTATTCCTGAGTCAGAC
TCTAAGATTCAAGCAGTTGAAACACTCCGCCACGACAGGTCTAATAAAATTTTGGAAATT
GAGGATGCATCTGAATCTGTCTCGCAGCAAGATAATCCTAGTGGCCCAGTGGCTCCATTA
ACTGATGCCTGCACCTTGACTCATGCATCCAACAAGCCTGCTGTCGATAACAAGCAGATG
GATACTCAACGTAGGCAAGAGGGATTTTCTGGTGTTATTACTGATGTTTCAAATGATTCT
CCTCCACAGTTCCCTTGTCACTCAACTGAGACGAATTCTCTTCATGATATCAGTACATAC
AAAATGGATGATTTACCTAGTTTTGATCTTGGATTTTAG

Peptide Sequence

PEP ID

XP_016494137.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107813383 isoform X3 [Nicotiana tabacum]
Sequence

MGDVKKWSVTYTKHLKQKRKVYHDGFLELQSSSHKAMLYDDCEKLLGIKILKNDDDVKTG
ETLPFDSYLVDIGDPHGDYNPIPKLNTKLMDKKVPVESGLLHSGKSSTAVDNRKSNLGKR
KATPSNLSPSQKIIREFKKSEASKYGSSPGSLDTTKSSTEEWQVLYTTQITQKAKKFHDG
YLRLVMSGSHGKQIMLYDATRRLLDSRFLKKNESIMSGQSVTFDGHLVEIGESEEDQKPP
KDLRDQGKHVTGLGKREPVHGDVGVHNKFPAEFKKSEVRKYSSSPGSLDMAKSSTEEWQV
LYTTQITQKAKKFHDGILRLVMSSSHGKQIMLYDATRRLLVSRFLKKNENIDSGESVTFD
GYLVDIGECKGDQKPPKDISPRGKHIKELGKRGPVHGEVAVLNKLLAEWDAMYTAQITQK
AKKYNNGILRLSSCGSYQSQVTLLTEEGNILCRRFLKLSEHVTTGTTLNLSNYLVEVGDM
RTSPEGKPQTDASSREHAQSDFKISGLDNIKSSRRISSDKPIPNMEHMDSKTASCSVDNT
MNCRISRSNSVRAAHEILSILKKPISSKGAGTVRDITFADECQVLQSSNLVCSDIKSQTE
EHLLQDFNVKGSSSLHREEQTTMTHSSGTNLSEIKVTDAFHLDEISQPSDCTGQRVYHTR
SLSLSTGLGEMDICLRDVECTVTERSPTAKLKHLVIPESDSKIQAVETLRHDRSNKILEI
EDASESVSQQDNPSGPVAPLTDACTLTHASNKPAVDNKQMDTQRRQEGFSGVITDVSNDS
PPQFPCHSTETNSLHDISTYKMDDLPSFDLGF

Transcript Sequence

Gene sequence data has not been registered.